API Reference¶
Bindings to FAMSA, an algorithm for fast multiple sequence alignments.
References
Deorowicz, S., Debudaj-Grabysz, A., Gudyś, A. (2016) FAMSA: Fast and accurate multiple sequence alignment of huge protein families. Scientific Reports, 6, 33964. doi:10.1038/srep33964.
Aligner¶
A single FAMSA aligner. |
Sequence¶
A digitized sequence. |
Alignment¶
An alignment, stored as a list of |
|
A gapped sequence, storing a single row in an alignment. |
GuideTree¶
A guide tree generated from several sequences. |